| تعداد نشریات | 24 |
| تعداد شمارهها | 916 |
| تعداد مقالات | 8,202 |
| تعداد مشاهده مقاله | 15,918,403 |
| تعداد دریافت فایل اصل مقاله | 13,468,807 |
Molecular characterization and the first full sequencing genome of chicken infectious anemia virus (CIAV) in Iran | ||
| Iranian Journal of Veterinary Research | ||
| دوره 22، شماره 4 - شماره پیاپی 77، 2021، صفحه 331-336 اصل مقاله (375.11 K) | ||
| نوع مقاله: Short paper | ||
| شناسه دیجیتال (DOI): 10.22099/ijvr.2021.38455.5593 | ||
| نویسندگان | ||
| H. Hosseini1؛ S. Majidi2؛ Z. Ziafati Kafi2؛ R. Esmaeelzadeh Dizaji2؛ A. Ghalyanchilangeroudi* 2 | ||
| 1Department of Clinical Science, Karaj Branch, Islamic Azad University, Karaj, Iran | ||
| 2Department of Microbiology and Immunology, Faculty of Veterinary Medicine, University of Tehran, Tehran, Iran | ||
| چکیده | ||
| Background: The chicken infectious anemia virus (CIAV) is an important pathogen that causes severe immunosuppression in young chickens. Aims: The study aims to characterize the genotype and full-length sequencing of CIAV strains in Iran. Methods: First, the collected thymus samples were investigated by conventional PCR for CIAV detection. Second, one of the CIAV positive samples (UT-Zahraee) was chosen for full genome sequencing. Results: Throughout 2017, we detected 13 CIAVs isolated from 40 broiler flocks of different provinces of Iran. A comparison of the complete sequences of the genome and homologies of the nucleotides revealed that UT-Zahraee had a high similarity with American and Egyptian CIAV isolates. Moreover, VP1 sequence analysis showed that UT-Zahraee shared high homology with previously reported Iranian CIAV strains, Chinese, and Egyptian isolates. Conclusion: This study is the first report of full genome sequencing of CIAV strain from Iran. It will be beneficial to understand better the epidemiology and molecular characteristics of CIAV circulating in Iran. | ||
| کلیدواژهها | ||
| Chicken infectious anemia virus؛ Full genome؛ Iran؛ Phylogenetic | ||
| مراجع | ||
|
Abdel-Mawgod, S; Adel, A; Arafa, AS and Hussein, HA (2018). Full genome sequences of chicken anemia virus demonstrate mutations associated with pathogenicity in two different field isolates in Egypt. Virus Dis., 29: 333-341.
Adams, MJ; Lefkowitz, EJ; King, AM; Harrach, B; Harrison, RL; Knowles, NJ; Kropinski, AM; Krupovic, M; Kuhn, JH and Mushegian, AR (2017). Changes to taxonomy and the international code of virus classification and nomenclature ratified by the International Committee on Taxonomy of Viruses (2017). Arch. Virol., 162: 2505-2538.
Aşkar, S (2019). Full-length genomic characterization of chicken anemia virus in turkey. Braz. J. Poult. Sci., 21: Epub 05 Dec 2019.
Campbell, G (2001). Investigation into evidence of exposure to infectious bursal disease virus (IBDV) and chick infectious anaemia virus (CIAV) in wild birds in Ireland. Proceedings of the 2nd International Symposium Infectious Bursal Disease and Chicken Infectious Anaemia, Rauischholzhausen, Germany. Institute of Poultry Diseases, Justus Liebig University, Giessen, Germany. PP: 230-233.
De Boer, G; Van Roozelaar, D; Moormann, R; Jeurissen, S; Van Den Wijngaard, J; Hilbink, F and Koch, G (1994). Interaction between chicken anaemia virus and live Newcastle disease vaccine. Avian Pathol., 23: 263-275.
Eltahir, YM; Qian, K; Jin, W and Qin, A (2011). Analysis of chicken anemia virus genome: evidence of intersubtype recombination. Virol. J., 8: 512-518.
Fang, L; Li, Y; Wang, Y; Fu, J; Cui, S; Li, X; Chang, S and Zhao, P (2017). Genetic analysis of two chicken infectious anemia virus variants-related gyrovirus in stray mice and dogs: The first report in China, 2015. Biomed Res. Int., 2017: 1-9.
Farhoodi, M; Toroghi, R; Bassami, M and Kianizadeh, M (2007). Chicken infectious anaemia virus infection among broiler chicken flocks in Iran. Arch. Razi Inst., 62: 1-6.
Farkas, T; Maeda, K; Sugiura, H; Kai, K; Hirai, K; Otsuki, K and Hayashi, T (1998). A serological survey of chickens, Japanese quail, pigeons, ducks and crows for antibodies to chicken anaemia virus (CAV) in Japan. Avian Pathol., 27: 316-320.
Gholami-Ahangaran, M (2015). Serological and molecular detection of chicken anaemia virus in Iranian poultry flocks. Vet. Ital., 51: 211-215.
Gholami-Ahangaran, M; Momtaz, H; Zia-Jahromi, N and Momeni, M (2011). Genomic detection of the chicken anaemia virus from apparently healthy commercial broiler chickens in Iran. Rev. Med. Vet., 162: 604-606.
Gholami-Ahangaran, M; Zia-Jahromi, N and Rahimi, E (2013). Molecular detection of chicken anaemia virus (CAV) in house sparrow (Passer domesticus) in Iran. Rev. Med. Vet., 164: 487-490.
Hailemariam, Z; Omar, AR; Hair-Bejo, M and Giap, TC (2008). Detection and characterization of chicken anemia virus from commercial broiler breeder chickens. Virol. J., 5: 128-138.
Hegazy, A; Abdallah, F; Abd-El Samie, L and Nazim, A (2010). Chicken infectious anemia virus (CIAV) in broilers and laying hens in Sharkia Province, Egypt. Am. J. Sci., 6: 752-761.
Hiremath, C; Jhala, M; Bhanderi, B and Joshi, C (2013). Cloning and sequence analysis of VP1, VP2 and VP3 genes of Indian chicken anemia virus. Iran. J. Vet. Res., 14: 354-357.
Kaffashi, A; Eshratabadi, F and Shoushtari, A (2017). Full-length infectious clone of an Iranian isolate of chicken anemia virus. Virus Genes. 53: 312-316.
Kimura, M (1980). A simple method for estimating evolutionary rates of base substitutions through com-parative studies of nucleotide sequences. J. Mol. Evol., 16: 111-120.
Kumar, S; Stecher, G and Tamura, K (2016). MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol., 33: 1870-1874.
Kye, SJ; Kim, JY; Seul, HJ; Kim, S; Kim, SE; Lee, HS; Sorn, S and Choi, KS (2013). Phylogenetic analysis and genetic characterization of chicken anemia virus isolates from Cambodia. Poul. Sci., 92: 2681-2686.
McNulty, M; Connor, T; McNeilly, F; Kirkpatrick, K and McFerran, J (1988). A serological survey of domestic poultry in the United Kingdom for antibody to chicken anaemia agent. Avian Pathol., 17: 315-324.
Natesan, S; Kataria, J; Dhama, K; Rahul, S and Baradhwaj, N (2006). Biological and molecular characterization of chicken anaemia virus isolates of Indian origin. Virus Res., 118: 78-86. Nayabian, H and Mardani, K (2013). Molecular characterization of the chicken anaemia viruses isolated from broiler farms of west Azerbaijan, Iran. Avian Pathol., 42: 108-113.
Nogueira, E; Brentano, L and Ferreira, AJP (2005). A VP3/VP1 gene polymerase chain reaction assay for detection of chicken anemia virus in broiler samples. Arq. Bras. Med. Vet. Zootec., 57: 131-140.
Oluwayelu, D; Todd, D and Olaleye, O (2008). Sequence and phylogenetic analysis of chicken anaemia virus obtained from backyard and commercial chickens in Nigeria. Onderstepoort J. Vet. Res., 75: 353-357.
Phenix, KV; Meehan, BM; Todd, D and McNulty, MS (1994). Transcriptional analysis and genome expression of chicken anaemia virus. J. Gen. Virol., 75: 905-909.
Pringle, C (1999). Virus taxonomy at the XIth international congress of virology, Sydney, Australia, 1999. Arch. Virol., 144: 2065-2070.
Rosenberger, JK and Cloud, SS (1989). The effects of age, route of exposure, and coinfection with infectious bursal disease virus on the pathogenicity and transmissibility of chicken anemia agent (CAA). Avian Dis., 33: 753-759.
Simionatto, S; da Veiga Lima-Rosa, CA; Binneck, E; Ravazzolo, AP and Canal, CW (2006). Characterization and phylogenetic analysis of Brazilian chicken anaemia virus. Virus Genes. 33: 5-10.
Sreekala, S; Gurpreet, K and Dwivedi, P (2019). Detection and molecular characterization of chicken infectious anaemia virus in young chicks in Punjab region of north-western India. Braz. J. Microbiol., 51: 805-813.
Todd, D; Creelan, JL; Mackie, DP; Rixon, F and McNulty, MS (1990). Purification and biochemical characterization of chicken anaemia agent. J. Gen. Virol., 71: 819-823.
Toroghi, R; Shoshtari, A; Charkhkar, S and Neyazi, M (2003). The first report of chicken infectious anaemia occurrence among Iranian broiler flocks. Proceedings of the 13th Iranian Veterinary Congress, 2003. P: 240.
Yao, S; Tuo, T; Gao, X; Han, C; Yan, N; Liu, A; Gao, H; Gao, Y; Cui, H and Liu, C (2019). Molecular epidemiology of chicken anaemia virus in sick chickens in China from 2014 to 2015. PLoS One, 14: e0210696.
Yuasa, N; Taniguchi, T and Yoshida, I (1979). Isolation and some characteristics of an agent inducing anemia in chicks. Avian Dis., 23: 366-385. | ||
|
آمار تعداد مشاهده مقاله: 1,313 تعداد دریافت فایل اصل مقاله: 813 |
||