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Emergence of variant avian infectious bronchitis virus in India | ||
| Iranian Journal of Veterinary Research | ||
| مقاله 6، دوره 21، شماره 1 - شماره پیاپی 70، 2020، صفحه 33-39 اصل مقاله (334.27 K) | ||
| نوع مقاله: Full paper (Original article) | ||
| شناسه دیجیتال (DOI): 10.22099/ijvr.2019.32861.4900 | ||
| نویسندگان | ||
| A. Raja* 1؛ G. Dhinakar Raj2؛ K. Kumanan3 | ||
| 1Department of Animal Biotechnology, Madras Veterinary College, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India | ||
| 2Center for Animal Health Studies, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India | ||
| 3Bioinformatics Centre and ARIS Cell, Madras Veterinary College, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India | ||
| چکیده | ||
| Background: Infectious bronchitis virus (IBV) is the etiological agent of an acute and highly contagious disease. Infectious bronchitis (IB) affects chicken of all ages and poses major economic loses to the poultry industry worldwide. The continuous evolution of the spike protein (S1) of IBV is responsible for the prevalence of many serotypes/genotypes around the world. Multiple lineages of IBV strains have been detected in chicken flocks in India since 2003. Aims: To detect IBV genotypes prevalent in India. Methods: Organ samples from 20 IBV-positive flocks with variable clinical signs were used for the amplification of the S1 gene of IBV by reverse transcriptase-polymerase chain reaction (RT-PCR). Results: Positive PCR amplicons were sequenced. Sequence analysis showed that 14 field isolates belonged to the GI-1 genetic lineage (Mass 41 serotype), two field isolates belonged to the GI-13 (UK 4/91 variant IBV strain), one field isolate grouped with GIII, GV, and GVI genetic lineage and three belonged to a variant genotype unique to India (GI-24). Phylogenetic analysis also showed a similar type of grouping within the field isolates. Among the fourteen GI-1 isolates, 12 were isolated between 2003 and 2006 and only two were isolated between 2009 and 2011. The two field isolates belonging to GI-13 were isolated in 2007, another one belonging to GIII, GV, and GVI was isolated in 2010 and three field isolates were not close to any reference IBV sequences isolated in 2006 (IND-TN-168-06), 2010 (IND-TN-280-10) and 2011 (IND-TN-290-11). Conclusion: A unique variant of IBV is emerging in India (GI-24). Our findings will have important implications for future vaccine intervention. | ||
| کلیدواژهها | ||
| Infectious bronchitis virus؛ Phylogeny؛ Sequence؛ Spike protein 1 gene؛ Variant infectious bronchitis virus | ||
| مراجع | ||
|
Bande, F; Arshad, SS; Omar, AR; Hair-Bejo, M; Mahmuda, A and Nair, V (2017). Global distributions and strain diversity of avian infectious bronchitis virus: a review. Anim. Health Res. Rev., 18: 70-83.
Bayry, J; Goudar, MS; Nighot, PK; Kshirsagar, SG; Ladman, BS and Gelb, J (2005). Emergence of a nephropathogenic avian infectious bronchitis virus with a novel genotype in India. J. Clin. Microbiol., 43: 916-918.
Boursnell, ME; Brown, TD; Foulds, IJ; Green, PF; Tonsley, FM and Binns, MM (1987). Completion of the sequence of the genome of the corona virus avian infectious bronchitis virus. J. Gen. Virol., 68: 57-77.
Casais, R; Dove, B; Cavanagh, D and Britton, P (2003). Recombinant avian infectious bronchitis virus expressing a heterologous spike gene demonstrates that the spike protein is a determinant of cell tropism. J. Virol., 77: 9084-9089.
Cavanagh, D (1983). Coronavirus IBV glycopolypeptides: size of their polypeptide moieties and nature of their oligosaccharide. J. Gen. Virol., 64: 1187-1191.
Cavanagh, D (1997). Nidoviridaes: a new order comprising Coronaviridae and Arteriviridae. Arch. Virol., 142: 629-633.
Cavanagh, D (2001). Commentary. A nomenclature for avian Coronavirus isolates and the question of species status. Avian Pathol., 30: 581-598.
Cavanagh, D (2007). Coronavirus avian infectious bronchitis virus. Vet. Res., 38: 281-297.
Cavanagh, D; Davis, PJ; Cook, JK; Li, D; Kant, A and Koch, G (1992). Location of the amino acid difference in the S1 spike glycoprotein subunit of closely related serotypes of infectious bronchitis virus. Avian Pathol., 21: 33-43.
Cavanagh, D; Elus, MM and Cook, JK (1997). Relationship between variation in the S1 spike protein of infectious bronchitis virus and the extent of cross-protection in vivo. Avian Pathol., 26: 63-74.
Cavanagh, D; Picault, JP; Gough, RE; Hess, M; Mawditt, K and Britton, P (2005). Variation in the spike protein of the 793/B type of infectious bronchitis virus, in the field and during alternate passage in chickens and embryonated eggs. Avian Pathol., 34: 20-25.
Chen, HW; Huang, YP and Wang, CH (2009). Identification of Taiwan and China-like recombinant avian infectious bronchitis viruses in Taiwan. Virus Res., 140: 121-129.
Ducatez, MF; Martin, AM; Owoade, AA; Olatoye, IO; Alkali, BR; Maikano, I; Snoeck, CJ; Sausy, A; Cordioli, P and Muller, CP (2009). Characterization of a new genotype and serotype of infectious bronchitis virus in Western Africa. J. Gen. Virol., 90: 2679-2685.
Elankumaran, S; Balachandran, C; Chandran, NDJ; Roy, P; Albert, A and Manickam, R (1999). Serological evidence for a 793/B related avian infectious bronchitis virus in India. Vet. Rec., 144: 299-300.
Farsang, A; Ros, C; Renstrom, LH; Baule, C; Soos, T and Belak, S (2002). Molecular epizootiology of infectious bronchitis virus in Sweden indicating the involvement of a vaccine strain. Avian Pathol., 31: 229-236.
Gaba, A; Dave, H; Paul, JK and Prajapati, KS (2010). Isolation, identification and molecular characterization of IBV variant from outbreak of visceral gout commercial broilers. Vet. World. 3: 375-377.
Jakhesara, SJ; Nath, B; Pal, JK; Joshi, CG and Kumar, S (2018). Emergence of a genotype I variant of avian infectious bronchitis virus from Northern part of India. Acta Trop., 183: 57-60.
Kant, A; Koch, G; van Roozelaar, DJ; Kusters, JG; Poelwik, FA and van der Zeijst, BA (1992). Location of antigenic sites defined by neutralizing monoclonal antibodies on the S1 avian infectious bronchitis virus glycopolypeptide. J. Gen. Virol., 73: 591-596.
Keeler, CLJr; Reed, KL; Nix, WA and Gelb, JJr (1998). Serotype identification of avian infectious bronchitis virus by RT-PCR of the peplomer (S-1) gene. Avian Dis., 42: 275-284.
Koch, L; Hartog, L; Kant, A and van Roozelaar, DJ (1990). Antigenic domains on the peplomer protein of avian infectious bronchitis virus: correlation with biological functions. J. Gen. Virol., 71: 1929-1935.
Kumanan, K; Tamizh Selvam, N; Dhinakar Raj, G and Nachimuthu, K (2004). Molecular epizootiology of infectious bronchitis isolates in Tamil Nadu indicating the possible involvement of a vaccine strain. Ind. Vet. J., 81: 1307-1310.
Kuo, L; Godeke, GJ; Raamsman, MJ; Masters, PS and Rottier, PJ (2000). Retargeting of coronavirus by substitution of the spike glycoprotein ectodomain: crossing the host cell species barrier. J. Virol., 74: 1393-1406.
Kusters, JG; Niesters, HG; Lenstra, JA; Horzinek, MC and van der Zeijst, BA (1989). Phylogeny of antigenic variants of avian coronavirus IBV. Virology. 169: 217-221.
Lee, CW; Hilt, DA and Jackwood, MW (2003). Typing of field isolates of infectious bronchitis virus based on the sequence of the hypervariable region in the S1 gene. J. Vet. Diagn. Invest., 15: 344-348.
Lim, TH; Lee, HJ; Lee, DJ; Lee, JN; Park, JK; Youn, HN; Kim, MS; Lee, JB; Park, SY; Choi, IS and Song, CS (2011). An emerging recombinant cluster of nephro-pathogenic strains of avian infectious bronchitis virus in Korea. Infect. Genet. Evol., 11: 678-685.
Lin, SY and Chen, HW (2017). Infectious bronchitis virus variants: molecular analysis and pathogenicity investigation. Int. J. Mol. Sci., 18: 2030. doi: 10.3390/ ijms18102030.
Mahmooda, ZH; Sleman, RR and Uthman, AU (2011). Isolation and molecular characterization of Sul/01/09 avian infectious bronchitis virus, indicates the emergence of a new genotype in the Middle East. Vet. Microbiol., 150: 21-27. Moore, KM; Jackwood, MW and Hilt, DA (1997). Identification of amino acids involved in a serotype and neutralization specific epitopes within the S1 subunit of avian infectious bronchitis virus. Arch. Virol., 142: 2249-2256.
Parveen, R; Farooq, L; Ahangar, S; Nazki, S; Dar, Z; Dar, T; Kamil, S and Dar, P (2017). Genotyping and phylogenetic analysis of infectious bronchitis virus isolated from broiler chickens in Kashmir. Virus Dis., 28: 434-438.
Patel, BH; Bhimani, MP; Bhanderi, BB and Jhala, MK (2015). Isolation and molecular characterization of nephropathic infectious bronchitis virus isolates of Gujarat state, India. Virus Dis., 26: 42-47.
Sadri, N; Ghalyanchilangeroudi, A; Fallah Mehrabadi, MH; Shayeganmehr, A; Sediqian, MS; Jabbarifakhr, M; Hosseini, H; Hamdan, AM and Mousavi, FS (2018). Genotyping of avian infectious bronchitis virus in Afghanistan (2016-2017): the first report. Iran. J. Vet. Res., 20: 60-63.
Sályi, G (1999). Certain disturbances in nitrogen metabolism of poultry; gout, urolithiasis and baby chick nephropathy. A review of the literature . Magyar Állatorvosok Lapja. 121: 91-99 (in Hungarian with English summary).
Sukumar, S and Prabhakar, TG (1993). An outbreak of infectious bronchitis among poultry in Tamil Nadu. Ind. J. Anim. Sci., 63: 820-822.
Sumi, V; Singh, SD; Dhama, K; Gowthaman, V; Barathidasan, R and Sukumar, K (2012). Isolation and molecular characterization of infectious bronchitis virus from recent outbreaks in broiler flocks reveals emergence of novel strain in India. Trop. Anim. Health Pro., 44: 1791-1795.
Suresh Kumar, K; Dhinakar Raj, G; Raja, A and Ramadass, P (2007). Genotyping of avian infectious bronchitis viruses from India. Ind. J. Biotech., 6: 45-51.
Valastro, V; Holmes, EC; Britton, P; Fusaro, A; Jackwood, MW; Cattoli, G and Monne, I (2016). S1-gene based phylogeny of infectious bronchitis virus: an attempt of harmonize virus classification. Infect. Genet. Evol., 39: 349-364.
Wang, L; Junker, D; Hock, L; Ebiary, E and Collisson, EW (1994). Evolutionary implications of genetic variations in the S1 gene of infectious bronchitis virus. Virus Res., 34: 327-338.
Wang, CH and Tsai, CT (1996). Genetic grouping for the isolates of avian infectious bronchitis viruses in Taiwan. Arch. Virol., 141: 1677-1688. | ||
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