| تعداد نشریات | 24 |
| تعداد شمارهها | 929 |
| تعداد مقالات | 8,346 |
| تعداد مشاهده مقاله | 16,802,810 |
| تعداد دریافت فایل اصل مقاله | 14,117,243 |
Genotyping of avian infectious bronchitis virus in Afghanistan (2016-2017): the first report | ||
| Iranian Journal of Veterinary Research | ||
| مقاله 11، دوره 20، شماره 1 - شماره پیاپی 66، 2019، صفحه 60-63 اصل مقاله (276.72 K) | ||
| نوع مقاله: Short paper | ||
| شناسه دیجیتال (DOI): 10.22099/ijvr.2019.5145 | ||
| نویسندگان | ||
| N. Sadri1؛ A. Ghalyanchilangeroudi* 1؛ M. H. Fallah Mehrabadi2؛ H. Hosseini3؛ A. Shayeganmehr4؛ M. S. Sediqian5؛ M. Jabbarifakhr1؛ A. M. Hamdan1؛ F. S. Mousavi1 | ||
| 1Department of Microbiology and Immunology, Faculty of Veterinary Medicine, University of Tehran, Tehran, Iran | ||
| 2Department of Poultry Diseases, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Tehran, Iran | ||
| 3Department of Clinical Sciences, Faculty of Veterinary Medicine, Karaj Branch, Islamic Azad University, Alborz, Iran | ||
| 4Department of Avian Diseases, Faculty of Veterinary Medicine, University of Tehran, Tehran, Iran | ||
| 5Department of Animal Science and Biology, Veterinary Faculty, Hariwa University, Herat, Afghanistan | ||
| چکیده | ||
| Background: Avian infectious bronchitis (IB) is a highly contagious viral disease which affects the poultry industry. The virus exists in a wide variety of genotypes, and phylogenetic analysis has been used to classify infectious bronchitis virus (IBV) strains. Aims: The object of the study is a molecular characterization of circulating IBV in Afghanistan as a first study. Methods: The tracheal tissue specimens from 100 different commercial broiler flocks with respiratory distress in Afghanistan were collected during 2016-2017. After real-time reverse transcriptase-polymerase chain reaction (RRT-PCR), IBV-positive samples were further characterized. A 390 bp hypervariable spike glycoprotein gene segment was amplified using Nested PCR, sequenced, and analyzed. Results: The results of real-time RT-PCR showed that 45/100 of the mentioned flocks were IBV positive. Phylogenetic analysis of all positive samples revealed that IBV strains were clustered into two distinct genotypes: LX4 (GI-19) (9/45) and IS-1494 like (GI-23) (34/45). Also, 2 of the 45 samples remained uncharacterized. Conclusion: It is the first study focusing on the molecular epidemiology of IBV in Afghanistan, extending our understanding of IB in the region. These results showed the high rate of IB infection in Afghanistan broiler farms and confirm the continuing monitoring of IBVs to modify the vaccination program. | ||
| کلیدواژهها | ||
| Afghanistan؛ Avian infectious bronchitis؛ Genotyping؛ GI-19؛ GI-23 | ||
| مراجع | ||
|
Ahmed, Z; Naeem, K and Hameed, A (2007). Detection and seroprevalence of infectious bronchitis virus strains in commercial poultry in Pakistan. Poult. Sci., 86: 1329-1335.
Al-Shekaili, T; Baylis, M and Ganapathy, K (2015). Molecular detection of infectious bronchitis and avian metapneumoviruses in Oman backyard poultry. Res. Vet. Sci., 99: 46-52. Bozorgmehri-Fard, M; Charkhkar, S and Hosseini, H (2014). Detection of the Chinese genotype of infectious bronchitis virus (QX-type) in Iran. Iran. J. Virol., 7: 21-24. Callison, SA; Hilt, DA; Boynton, TO; Sample, BF; Robison, R; Swayne, DE and Jackwood, MW (2006). Development and evaluation of a real-time Taqman RT-PCR assay for the detection of infectious bronchitis virus from infected chickens. J. Virol. Methods. 138: 60-65. De Wit, J; Cook, JK and Van Der Heijden, HM (2011). Infectious bronchitis virus variants: a review of the history, current situation and control measures. Avian Pathol., 40: 223-235. De Wit, J; Nieuwenhuisen-van Wilgen, J; Hoogkamer, A; Van De Sande, H; Zuidam, G and Fabri, T (2011). Induction of cystic oviducts and protection against early challenge with infectious bronchitis virus serotype D388 (genotype QX) by maternally derived antibodies and by early vaccination. Avian Pathol., 40: 463-471. Dolz, R; Pujols, J; Ordóñez, G; Porta, R and Majó, N (2006). Antigenic and molecular characterization of isolates of the Italy 02 infectious bronchitis virus genotype. Avian Pathol., 35: 77-85. Dolz, R; Pujols, J; Ordóñez, G; Porta, R and Majó, N (2008). Molecular epidemiology and evolution of avian infectious bronchitis virus in Spain over a fourteen-year period. Virology. 374: 50-59. Franzo, G; Massi, P; Tucciarone, CM; Barbieri, I; Tosi, G; Fiorentini, L; Ciccozzi, M; Lavazza, A; Cecchinato, M and Moreno, A (2017). Think globally, act locally: phylodynamic reconstruction of infectious bronchitis virus (IBV) QX genotype (GI-19 lineage) reveals different population dynamics and spreading patterns when evaluated on different epidemiological scales. PloS One. 12: e0184401. Habibi, M; Karimi, V; Langeroudi, AG; Ghafouri, S; Hashemzadeh, M; Farahani, R; Maghsoudloo, H; Abdollahi, H and Seifouri, P (2017). Combination of H120 and 1/96 avian infectious bronchitis virus vaccine strains protect chickens against challenge with IS/1494/06 (variant 2)-like infectious bronchitis virus. Acta Virol. 61: 150-160. Hamadan, AM; Ghalyanchilangeroudi, A; Hashemzadeh, M; Hosseini, H; Karimi, V; Yahyaraeyat, R and Najafi, H (2017). Genotyping of avian infectious bronchitis viruses in Iran (2015-2017) reveals domination of IS-1494 like virus. Virus Res., 240: 101-106. Hosseini, H; Bozorgmehri Fard, MH; Charkhkar, S and Morshed, R (2015). Epidemiology of avian infectious bronchitis virus genotypes in Iran (2010-2014). Avian Dis., 59: 431-435. Hussein, AH; Emara, M; Rohaim, M; Ganapathy, K and Arafa, A (2014). Sequence analysis of infectious bronchitis virus IS/1494 like strain isolated from broiler chicken co-infected with Newcastle disease virus in Egypt during 2012. Int. J. Poult. Sci., 13: 530-536. Kahya, S; Coven, F; Temelli, S; Eyigor, A and Carli, KT (2013). Presence of IS/1494/06 genotype-related infectious bronchitis virus in breeder and broiler flocks in Turkey. Ankara Univ. Vet. Fak. Derg., 60: 27-31. Kumar, S; Stecher, G and Tamura, K (2016). MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol., 33: 1870-1874. Lim, TH; Lee, HJ; Lee, DH; Lee, YN; Park, JK; Youn, HN; Kim, MS; Lee, JB; Park, SY and Choi, IS (2011). An emerging recombinant cluster of nephropathogenic strains Liu, S; Chen, J; Han, Z; Zhang, Q; Shao, Y; Kong, X and Tong, G (2006). Infectious bronchitis virus: S1 gene characteristics of vaccines used in China and efficacy of vaccination against heterologous strains from China. Avian Pathol., 35: 394-399. Najafi, H; Langeroudi, AG; Hashemzadeh, M; Karimi, V; Madadgar, O; Ghafouri, SA; Maghsoudlo, H and Farahani, RK (2015). Molecular characterization of infectious bronchitis viruses isolated from broiler chicken farms in Iran, 2014-2015. Arch. Virol., 161: 1-10. Najafi, H; Langeroudi, AG; Hashemzadeh, M; Karimi, V; Madadgar, O; Ghafouri, SA; Maghsoudlo, H and Farahani, RK (2016). Molecular characterization of infectious bronchitis viruses isolated from broiler chicken farms in Iran, 2014-2015. Arch. Virol., 161: 53-62. Ovchinnikova, EV; Bochkov, YA; Shcherbakova, LO; Nikonova, ZB; Zinyakov, NG; Elatkin, NP; Mudrak, NS; Borisov, AV and Drygin, VV (2011). Molecular characterization of infectious bronchitis virus isolates from Russia and neighbouring countries: identification of intertypic recombination in the S1 gene. Avian Pathol., 40: 507-514. Seger, W; GhalyanchiLangeroudi, A; Karimi, V; Madadgar, O; Marandi, MV and Hashemzadeh, M (2016). Genotyping of infectious bronchitis viruses from broiler farms in Iraq during 2014-2015. Arch. Virol., 161: 1229-1237. Valastro, V; Holmes, EC; Britton, P; Fusaro, A; Jackwood, MW; Cattoli, G and Monne, I (2016). S1 gene-based phylogeny of infectious bronchitis virus: an attempt to harmonize virus classification. Infect. Genet. Evol., 39: 349-364. Worthington, KJ; Currie, R and Jones, RC (2008). A reverse transcriptase-polymerase chain reaction survey of infectious bronchitis virus genotypes in Western Europe from 2002 to 2006. Avian Pathol., 37: 247-257. Zafar, M (2005). First draft country report on the status and perspectives of the animal genetic resources development and conservation in Islamic Republic of Afghanistan. Kabul, Afghanistan: FAO. Zhao, W; Gao, M; Xu, Q; Xu, Y; Zhao, Y; Chen, Y; Zhang, T; Wang, Q; Han, Z and Li, H (2017). Origin and evolution of LX4 genotype infectious bronchitis coronavirus in China. Vet. Microbiol., 198: 9-16. | ||
|
آمار تعداد مشاهده مقاله: 1,575 تعداد دریافت فایل اصل مقاله: 901 |
||