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Cheraghi, Arezoo, Rahmani, Fatemeh, Hassanzadeh-Ghorttapeh, Abdollah. (1397). IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica. , 7(3), 125-132. doi: 10.22099/mbrc.2018.29924.1327
Arezoo Cheraghi; Fatemeh Rahmani; Abdollah Hassanzadeh-Ghorttapeh. "IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica". , 7, 3, 1397, 125-132. doi: 10.22099/mbrc.2018.29924.1327
Cheraghi, Arezoo, Rahmani, Fatemeh, Hassanzadeh-Ghorttapeh, Abdollah. (1397). 'IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica', , 7(3), pp. 125-132. doi: 10.22099/mbrc.2018.29924.1327
Cheraghi, Arezoo, Rahmani, Fatemeh, Hassanzadeh-Ghorttapeh, Abdollah. IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica. , 1397; 7(3): 125-132. doi: 10.22099/mbrc.2018.29924.1327

IRAP and REMAP based genetic diversity among varieties of Lallemantia iberica

Molecular Biology Research Communications
مقاله 4، دوره 7، شماره 3، 2018، صفحه 125-132    اصل مقاله (232.89 K)
نوع مقاله: Original article
شناسه دیجیتال (DOI): 10.22099/mbrc.2018.29924.1327
نویسندگان
Arezoo Cheraghi1؛ Fatemeh Rahmani* 1؛ Abdollah Hassanzadeh-Ghorttapeh2
1Biology Department, Faculty of Sciences, Urmia University, Urmia, Iran
2Horticulture Crop Research Department, West Agricultural and Natural Resources Research and Education Center, Urmia, Iran
چکیده
This study describes the genetic relationships among 34 varieties of Lallemantia iberica using inter-retrotransposon amplified polymorphism (IRAP) and retrotransposon-microsatellite amplified polymorphism (REMAP). Samples were collected from Agriculture Research Center of Urmia city (northwest Iran). Ten IRAP and REMAP primers generated 76 scorable electrophoretic bands with 78.94% polymorphism. The pair-wise Jacquard genetic similarity varied from 0.48 to 0.94 for IRAP and REMAP data combined. Average PIC values for IRAP and REMAP markers were 0.38. The retro-elements marker system produced 76 alleles in range of 100- 3000 bp. The cophenetic correlation coefficient between Jaccard’s similarity matrix and the plotted dendrogram was 0.66. A dendrogram constructed based on COMPLETE LINKAGE. Cluster analysis of IRAP and REMAP data using the NTSYSpc 2.02 resulted in five clusters. The present study represents high genetic distance at genotype level suggesting that IRAP and REMAP markers are useful for Lallemantia ibericagenetic diversity analysis.
کلیدواژه‌ها
Genetic diversity؛ IRAP؛ REMAP؛ Lallemantia iberica؛ Dendrogram
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